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NIST Social Media Day Open Notebook Science Talk Jean-Claude Bradley presented on Open Notebook Science at the NIST Social Media Day on December 11, 2008. The talks starts with an overview of ONS and how it is being used to assess solubility measurements being crowdsourced in the ONS Challenge and Submeta Awards. The use of wikis, blogs, Google Spreadsheets, YouTube, Flickr, ChemSpider and other free hosted Web2.0 tools is highlighted. The UsefulChem project, involving the synthesis of anti-malarial agents, is then briefly covered. F ... Listen | Listen in your iPhone | Download | View full cache | Visit Website NIST Social Media Day Open Notebook Science Talk Jean-Claude Bradley presented on Open Notebook Science at the NIST Social Media Day on December 11, 2008. The talks starts with an overview of ONS and how it is being used to assess solubility measurements being crowdsourced in the ONS Challenge and Submeta Awards. The use of wikis, blogs, Google Spreadsheets, YouTube, Flickr, ChemSpider and other free hosted Web2.0 tools is highlighted. The UsefulChem project, involving the synthesis of anti-malarial agents, is then briefly covered. F ... Listen | Listen in your iPhone | Download | View full cache | Visit Website iSchool Open Notebook Science Talk update: transcript availableThis talk covers Open Notebook Science from an information technology perspective. It was presented by Jean-Claude Bradley at the Drexel iSchool on November 11, 2008. Although solubility measurements and chemical reactions are mentioned the focus is more on how information is stored, retrieved and used using free and hosted services such as Blogger, GoogleDocs, Wikispaces, ChemSpider, CDD and others. The UsefulChem project and the Open Notebook Science Challen ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Open Notebook Science in 15 minutes On October 10, 2008 Jean-Claude Bradley presented a 15 minute summary of Open Notebook Science and its application to the synthesis of anti-malarial compounds as part of a mini-symposium on faculty research in the Chemistry department at Drexel University.Audio podcast (mp3)GoogleVideoSlideshareOpen Notebook Science in 15 minutesView SlideShare presentation or Upload your own. (tags: open notebook) Listen | Listen in your iPhone | Download | View full cache | Visit Website Chemistry Concepts in Second Life - Bradley/Lang This is a co-presentation by Jean-Claude Bradley and Andrew Lang on August 18, 2008 at the American Chemical Society conference in Philadelphia. The focus is on many of the tools available to easily demonstrate chemistry concepts in Second Life such as 3D molecules, reaction mechanisms, docking, organic chemistry quizzes, 5D graphs, the ACS museum featuring an HIV exhibit, the red tide phenomenon and many others. Most of the content on display rests on ACS island, Drexel Island and Nature's ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Open Notebook Science - Falcipain-2 Preliminary Results This talk was presented by Jean-Claude Bradley at the American Chemical Society meeting in Philadelphia on August 20, 2008. An introduction to Open Notebook Science is presented followed by an illustration of how ONS can be used in drug discovery. New data relating to the anti-malarial activity of Ugi products on 2 falcipain-2 docking sites is detailed. The docking calculations were provided by Rajarshi Guha and the enzyme and in vitro assays on Plasmodium falciparum were provided by Phil R ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Second Life and Social Media: Networking Goldmine or Time Sink? This talk was presented by Jean-Claude Bradley at the American Chemical Society meeting in Philadelphia on August 18, 2008.This is an overview of how social media and Second Life can be used to productively network. Prominent recent examples involving Deepak Singh, Bora Zivkovic, Beth Ritter-Guth and others are highlighted. Then Second Life content that enables collaboration, especially in chemistry, is detailed. The presentation ends with an example of hyper-networking using FriendFeed fol ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Open Notebook Science BCCE 2008 Update: transcript now availableThis is a presentation by Jean-Claude Bradley at the Biennial Conference for Chemical Education (BCCE) on July 29, 2008. The talk starts with an overview of Open Notebook Science using a wiki as a public lab notebook. An example of the usefulness of publishing failed experiments is detailed, showing how the version history of the wiki can be used to track the evolution of an organic chemistry experiment. Near the end of the talk an example of using automation ... Listen | Listen in your iPhone | Download | View full cache | Visit Website LISE08 talk on Second Life in the Chemistry Classroom I talked about Second Life in the chemistry classroom at the Chemical Heritage Foundation on April 29, 2008. This was part of the 8th Annual Leadership Initiative in Science Education (LISE 8). Most examples involve work done in collaboration with Andrew Lang. At the end I invite the group to an in-world meeting on May 6, 2008 at 13:30 EDT on ACS island. (slurl)audio mp3PowerpointGoogle video screencast Listen | Listen in your iPhone | Download | View full cache | Visit Website ACS Talk on Cheminformatics in Open Notebook Science I present at the American Chemical Society meeting in New Orleans on April 6, 2008. The use cheminformatics tools such as SMILES, InChI, InChIKeys and JCAMP-DX to store and retrieve experimental information on a public laboratory notebook is detailed.audio (mp3)Powerpointscreencast (Google Video) Listen | Listen in your iPhone | Download | View full cache | Visit Website ACS Talk on Teaching Chemistry with Second Life I present on using Second Life to teach chemistry at the American Chemical Society meeting in New Orleans April 7, 2008. Examples include using quizzes, generating 3D molecules, visualizing docking, proteins and reactions. An overview of ACS island is also given, with a focus on the Sci-Mix virtual poster session. Much of this work was done in collaboration with Andrew Lang.audio (mp3)Powerpointscreencast (Google Video) Listen | Listen in your iPhone | Download | View full cache | Visit Website UBC Talk on Open Notebook Science and Libraries I presented a talk about Open Notebook Science and the implications for the future of libraries for Heather Morrison's class at the School of Libraries at the University of British Columbia on April 2, 2008. We did this over Skype so the questions are not very clear in the audio.audio (mp3)PowerpointScreencast (Google Video) Listen | Listen in your iPhone | Download | View full cache | Visit Website Open Notebook Science and Cheminformatics I guest lectured on Rajarshi Guha's cheminformatics course at Indiana University on March 25, 2008. After an introduction to Open Notebook Science and the synthesis of anti-malarial compounds, I discuss SMILES, InChIs, InChIKeys, CMLRSS, JCAMP-DX, JSpecView, ExcelVBA, blogs, wikis and Second Life.audio (mp3)PowerpointScreencast on SciVee Listen | Listen in your iPhone | Download | View full cache | Visit Website Albright Talk on Educational Technology Here is my talk at Albright College on March 17, 2008. I mainly discussed the evolution in my use of blogs, wikis and Second Life in the teaching of undergraduate organic chemistry courses.audio (mp3)Powerpointscreencast Listen | Listen in your iPhone | Download | View full cache | Visit Website NFAIS 2008 talk on Open Notebook Science Jean-Claude Bradley presents on "Open Notebook Science: Putting the Information User in Control through Transparency" at the NFAIS meeting in Philadelphia on February 24, 2008. This was part of the session on "The Emerging Culture of the New Information Order". The use of public blogs, wikis, GoogleDocs and mailing lists to conduct research on the synthesis of new anti-malarial agents is described.Audio (mp3)PowerpointScreencast (Google video) Listen | Listen in your iPhone | Download | View full cache | Visit Website The Role of Blogging in Open Notebook Science I spoke at the North Carolina Science Blogging Conference (un-conference really) on January 19, 2008. Mainly I reviewed some of my posts on the UsefulChem blog from the past few months to show what types of issues are relevant to doing research openly. I then showed the connection from the blog to the wiki, mailing list and GoogleDocs where the laboratory data get reported and analyzed.Here is the audio (mp3)Screencast (SciVee)PowerpointMy co-presenter Xan Gregg's talk screencast (SciVee ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Swarthmore Sigma Xi ONS Talk On November 27, 2007 I presented our work on Open Notebook Science. I had a little more time to explain most aspects of our work to a scientific, but not necessarily a chemistry audience.Near the end I did discuss some of our very recent results relating to our CombiUgi project and the synthesis of some compounds about to to be tested for the inhibition of the malarial parasite's enzyme Falcipain-2.Here is the audio (mp3)Here is the Flash screencast.Here is the Powerpoint. Listen | Listen in your iPhone | Download | View full cache | Visit Website Cameron Neylon Drexel Talk A Beginner’s Guide to Open Science(not for beginners but by beginners)A talk by Cameron NeylonSTFC Rutherford Appleton Laboratory and School of Chemistry, University of SouthamptonAudio (mp3)Flash ScreencastGoogle VideoPowerpointPresentation at 2:00 Friday November 2, 2007Disque 109, Drexel UniversityThe modern biochemistry or molecular biology laboratory generates large quantities of data that are generally stored across multiple computers attached to multiple instruments. Much of this dat ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Bill Erb Thesis Defense Bill Erb's thesis defense on June 12, 2007 at the Drexel University Chemistry Department. Exploration of the Fundamentals of Matrix Assisted Laser Desorption/Ionization Time-of-Flight Mass SpectrometryThis thesis focuses on the study of different tools that can be used for preparing samples for matrix assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI TOFMS) and utilizing these tools to study different ionization processes that are operating in the MALDI experimen ... Listen | Listen in your iPhone | Download | View full cache | Visit Website BCLA Open Notebook Science and the Library This is my April 19, 2007 presentation at the British Columbia Library Association Conference on Open Access. There was only time to do a brief introduction about trends in openness in education and research and how that might affect the needs of scientists in publishing and finding information. I also showed a few screenshots of UsefulChem near the end.Thanks to Heather Morrison for the invitation!audio (mp3)Flash ScreencastPowerpoint Listen | Listen in your iPhone | Download | View full cache | Visit Website Open Notebook Science and Education This is my presentation on April 17, 2007 at the Chemical Heritage Foundation in Philadelphia, PA. I describe Open Notebook Science in the context of education and argue that trends in open education, open science and automation will change the educational landscape in the near future.audio (mp3)Flash screencastPowerpoint Listen | Listen in your iPhone | Download | View full cache | Visit Website Open Notebook Science ACS March07 (JCB) Here is my talk "Open Notebook Science using Blogs and Wikis" at the American Chemical Society meeting in Chicago on March 27, 2007 at the Communicating Chemistry Symposium.The first half is basically a condensed summary of how we are using UsefulChem to do Open Science. I then demonstrate for the first time Dave's Excel code to compute kinetics from JCAMP NMR reaction profiles and the building in Second Life where Beth and Eloise have help me to set up a poster room with NMR spectra, mole ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Teaching Organic Chemistry with Blogs and Wikis (JCBMarch07) This is my first talk at the American Chemical Society conference in Chicago on March 25, 2007. I describe the evolution of my teaching practices using technology over the past few years, involving blogs, wikis, podcasting, vodcasting, games and class workshops.audio podcast (mp3)streaming Flash screencastPowerpoint Listen | Listen in your iPhone | Download | View full cache | Visit Website Dan King PAETC07 Where is technology most effective: inside or outside of the classroom?Dan King, Drexel UniversityPhiladelphia Area Educational Technology Conference Feb 23, 2007At Drexel University, environmental chemistry is taught to a diverse group of students in a single class. The student population includes both upper level undergraduates and beginning graduate students from a variety of majors. The preparation level of these populations is quite variable, as many of the graduate students have not h ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Gall and Pritchard PAETC07 iTunes U ImplementationBrian Gall and Russ Pritchard, Philadelphia UniversityPhiladelphia Area Educational Technology Conference Feb 23, 2007Philadelphia University has implemented a new hosting solution for its educational audio and video content. Learn how we implemented the iTunes University Podcasting solution to create a collaborative learning and information space for the administration, faculty, students and learning community. audio (mp3)Powerpoint Listen | Listen in your iPhone | Download | View full cache | Visit Website Mike Zarro PAETC07 Don't Make Me Think - I'm Here to LearnMike Zarro, Drexel UniversityPhiladelphia Area Educational Technology Conference Feb 23, 20073.2 million people took at least one class online in the fall of 2005. As a student in Drexel University's online Master of Library Science program and a webmaster for 8+ years, I'll share my experiences and observations of eLearning success and areas of improvement. Online education more than just Blackboard - it includes video, podcasts, and online collaborat ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Jean-Claude Bradley PAETC07 Leveraging Wikis and Blogs for Teaching and Research in ChemistryJean-Claude Bradley, Drexel UniversityPhiladelphia Area Educational Technology Conference Feb 23, 2007An overview of the UsefulChem project presented to a group of instructional technologists. audio (mp3)screencast (Flash)Powerpoint Listen | Listen in your iPhone | Download | View full cache | Visit Website Laura Blankenship PAETC07 Interactivism: Blogging in Freshman WritingLaura Blankenship, Bryn Mawr CollegePhiladelphia Area Educational Technology Conference Feb 23, 2007See a presentation of results from using blogs in a freshman writing class. In particular, I will discuss the affect that online interaction has on the process of writing and what elements of blogging are most effective.audio (mp3)screencast (Flash)Powerpoint Listen | Listen in your iPhone | Download | View full cache | Visit Website Tim McGee PAETC07 Towards Preparing Educators for MultiliteracyTim McGee, Philadelphia UniversityPhiladelphia Area Educational Technology Conference Feb 23, 2007The teaching of print literacy, traditionally understood as the ability to read and write texts made primarily out of words, was the responsibility of all teachers at the elementary level and the specialty of English, Language Arts, and Composition teachers in middle school, high school, and college. With the advent of digital computers and the multi ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Second Life in Education Tim Siftar from our Hagery library at Drexel gave a talk this morning about Second Life basics and some educational applications. It was a really good introduction and hopefully some of the people in attendance will get inspired to give it a try.We then met Beth in-world and she shared lots of tips about getting started and teleported us to a few educational places. Josh controlled our avatar. Unfortunately, Beth couldn't record her part with Camtasia because of the computational demands ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Google Co-op Workshop Here is the Jan 29, 2007 Google co-op workshop that I ran at Drexel. The first half is an overview of free online educational materials that can be used as resources for teaching. In the second part I demonstrate how these can be used in an organic chemistry class and how to build custom search engines to ensure that students find only material validated by the teacher. In another example I show how a search engine for funding sources could be created.The examples are available on this w ... Listen | Listen in your iPhone | Download | View full cache | Visit Website NC Science Blogging Conference Here is my presentation at the North Carolina Science Blogging conference on Jan 20, 2007. I led a session in the afternoon on Open Source/Open Notebook Science and this is the part before opening up to general discussion. It starts off with an overview of the UsefulChem project in my lab, including our use of JCAMP and JSpecView to provide data mining of our NMR spectra. Other efforts towards doing science openly using blogs and wikis are then highlighted, including:Neurodatabase.orgOrg ... Listen | Listen in your iPhone | Download | View full cache | Visit Website Communication Strategies of Traditional and Open Chemists This is a link to a presentation delivered to students at Texas Tech University on the communication strategies of traditional and open chemists based on the "system" and "lifeworld" theories of Jurgen Habermas. Podcast (mp3) Screencast Listen | Listen in your iPhone | Download | View full cache | Visit Website LCCC Closed Chemistry Interview The students in English 105 Honors at Lehigh Carbon Community College interviewed Kim Ashman, Director of Quality and Compliance, at Sonofi-Aventis. While she discusses "closed" chemistry and drug development, the students are using this information to frame an argument to promote Open Notebook Science. Some of the questions discuss patenting and competition and large mergers. MP3 Listen | Listen in your iPhone | Download | View full cache | Visit Website JSpecView Demo This is a screencast of how to use JSpecView to analyze spectra from an experiment involving the synthesis of anti-malarial compounds. It demonstrates the utility of delving deeply into the raw data of "failed experiments". More chemistry details available here. Here is the audio podcast (mp3). Listen | Listen in your iPhone | Download | View full cache | Visit Website Stewart Mader Wiki Talk at Drexel Stewart gave a good general talk about wikis followed by a few examples in education. Here is the podcast (mp3). Here is the Flash Screencast. Drexel CoAS E-Learning Lecture Series Time: 11:00 Thursday October 26, 2006 Location: Disque 109 Four Letter Words: How wiki and edit are making the Internet a better learning tool Stewart Mader, Senior Instructional Technologist, Life Sciences and Brown Medical School, Brown University A Wiki can be thought of as ... Listen | Listen in your iPhone | Download | View full cache | Visit Website UsefulChem Drexel MiniSymp The chemistry department at Drexel had a minisymposium on Sept 27, 2006 from our faculty to educate our grad and undergrad students (and each other) as to what we were doing. The talks were limited to 15 minutes so it was a good way to get an overview of all the research projects. My talk was about the UsefulChem project. It was similar to the one I gave at the ACS meeting a few weeks ago but a bit shorter at 13 minutes. Keeping in mind the diversity in the audience I tried to keep it f ... Listen | Listen in your iPhone | Download | View full cache | Visit Website ACS UsefulChem talk (podcast) Here is my talk at the American Chemical Society on September 14, 2006 in San Francisco. This is a fairly condensed summary of the UsefulChem project, with plenty of examples on how we use blogs and wikis to do open source science. podcast (mp3) video iPod format (m4v) streaming Flash screencast Powerpoint slides Listen | Listen in your iPhone | Download | View full cache | Visit Website Interview with Jean-Claude Bradley The students in Beth Ritter-Guth's Honors English 105 class interviewed Dr. Bradley about Open Source Science. The students are working on a project that traces the issues of malaria, AIDS, and arsenic from Dr. Bradley's lab at Drexel to children living in Kabala, Sierra Leone. The project, Community College without Borders, seeks to help students recognize the collaborative efforts of various disciplines in solving the world's greatest problems. Interview (mp3) Listen | Listen in your iPhone | Download | View full cache | Visit Website Teaching with Technology Overview This is a podcast overview of wiki and blogs and of other information found at Teaching Tools for Teachers and Professors. Podcast Flash Screencast Podcast (m4v) Listen | Listen in your iPhone | Download | View full cache | Visit Website BCCE chem screencasting Bradley talk This is my 10 minute talk on July 31, 2006 at the BCCE (Biannual Conferences on Chemical Education) held at Purdue. I co-presented with Mark Ott about using screencasting for chemistry classes. It was good way to contrast our different approaches. Mark records 5-10 min scripted screencasts of key general chemistry concepts in his office alone while I record my entire organic chemistry lectures. I use my lecture archive to replace live lectures with workshops while he still teaches in le ... Listen | Listen in your iPhone | Download | View full cache | Visit Website UsefulChem/CCWB Podcast The following podcast outlines a collaborative project between Jean-Claude's chemistry students and Beth's writing students at LCCC. The project hopes to bridge the communication gap between scientists and writers by providing students an opportunity to work together to open source scientific research. Podcast (mp3) Screencast (mov) PPT Slides Listen | Listen in your iPhone | Download | View full cache | Visit Website LCTI/LCCC workshop Ritter-Guth Here is Beth's abstract for her talk from the June 30, 2006 workshop at the Lehigh Career and Technology Institute and Lehigh Carbon Community College: The tools used to create podcasts, vodcasts, and screencasts are easy and fun to use. By relying on programs like Audacity, Camstudio, Feedburner, Bloglines, iTunes, Skype, Sitemeter, and Vyew, instructors can create a rich and diverse instructional environment for students. The use of wikis in the classroom offer an easy and accessbile a ... Listen | Listen in your iPhone | Download | View full cache | Visit Website LCTI/LCCC workshop Bradley Here is my talk from the June 30, 2006 workshop at the Lehigh Career and Technology Institute and Lehigh Carbon Community College. I spent more time than I usually do explaining the basics of RSS and its applications in education using blogs, wikis, podcasting, vodcasting, screencasting and games. I also discuss my views on open courseware. podcast (mp3) streaming Flash screencast video iPod format (m4v) Powerpoint slides Listen | Listen in your iPhone | Download | View full cache | Visit Website